Hi, I'm Jeff.
I'm a research scientist in computational biology at Deep Genomics in Toronto. Before that, I did my PhD work on building computational methods to reconstruct the evolutionary history of cancer in individual patients as part of Quaid Morris' lab at the University of Toronto and Memorial Sloan Kettering Cancer Center.
HTSeq is a wonderfully useful Python library for analyzing high-throughput sequencing data. I implemented an algorithm to perform set subtraction on its GenomicIntervals.